Infercnv-MCP
JSON →Infer Copy Number Variations (CNVs) from single-cell RNA-Seq data using a natural language interface.
Install
pip install infercnv-mcp Tools · 4
- IO module Read and write scRNA-Seq data, load gene positions
- Preprocessing module Compute neighbors and prepare data for CNV inference
- Tool module Infer CNVs and compute CNV scores
- Plotting module Generate chromosome heatmaps, UMAP, and t-SNE visualizations
Links
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