{"library":"snakemake-executor-plugin-cluster-generic","title":"snakemake-executor-plugin-cluster-generic","type":"library","description":"A Snakemake executor plugin for generic cluster submission via command-line tools like qsub, sbatch, bsub. It allows users to define cluster submission commands via Snakemake profiles or configuration. Current version: 1.0.9. Releases are driven by upstream Snakemake interface changes; no fixed cadence.","language":"python","status":"active","last_verified":"Mon Apr 27","install":{"commands":["pip install snakemake-executor-plugin-cluster-generic"],"cli":null},"imports":["from snakemake_executor_plugin_cluster_generic import ClusterGenericExecutor"],"auth":{"required":false,"env_vars":[]},"links":{"homepage":"https://snakemake.github.io","github":"https://github.com/snakemake/snakemake-executor-plugin-cluster-generic","docs":"https://snakemake.github.io/snakemake-plugin-catalog/plugins/executor/cluster-generic.html","changelog":null,"pypi":"https://pypi.org/project/snakemake-executor-plugin-cluster-generic/","npm":null,"openapi_spec":null,"status_page":null,"smithery":null},"quickstart":{"code":"import os\nfrom snakemake_executor_plugin_cluster_generic import ClusterGenericExecutor\n\n# Typically configured via Snakemake profile, but you can instantiate directly:\nexecutor = ClusterGenericExecutor()\n# Then pass to Snakemake workflow (requires proper context)\nprint('Executor ready')","lang":"python","description":"Instantiate the plugin executor. Usually configured via Snakemake profiles; this shows direct usage.","tag":null,"tag_description":null,"last_tested":null,"results":[]},"compatibility":null}