{"library":"pyhmmer","type":"library","category":null,"description":"pyhmmer provides high-performance Cython bindings and a Pythonic interface to the HMMER3 C library, enabling powerful sequence analysis using Hidden Markov Models. It is used for searching protein and nucleic acid sequence databases, identifying remote homologs, and building profile HMMs. The current stable version is 0.12.0, with a release cadence of several minor versions per year, indicating active development.","language":"python","status":"active","version":"0.12.0","tags":["bioinformatics","HMM","sequence-analysis","HMMER","genomics","proteomics"],"install":[{"cmd":"pip install pyhmmer","imports":["from pyhmmer.easel import Alphabet","from pyhmmer.easel import Sequence","from pyhmmer.hmm import HMM","from pyhmmer.pipeliner import Pipeline","from pyhmmer.plan7 import HMMFile"]},{"cmd":"conda install -c bioconda pyhmmer","imports":[]}],"homepage":null,"github":"https://github.com/althonos/pyhmmer","docs":"https://pyhmmer.readthedocs.io/en/stable/","changelog":"https://github.com/althonos/pyhmmer/blob/master/CHANGELOG.md","pypi":"https://pypi.org/project/pyhmmer/","npm":null,"openapi_spec":null,"status_page":null,"smithery":null,"compatibility":{"summary":{"python_range":"3.10–3.9","success_rate":50,"avg_install_s":2.1,"avg_import_s":0.22,"wheel_type":"wheel"},"url":"https://checklist.day/v1/registry/pyhmmer/compatibility"},"provenance":{"verified_status":"passing","verified_at":"Sun Jun 28","last_verified":"Sun Jun 28","next_check":"Tue Jul 28","install_tag":null}}