{"library":"biom-format","type":"library","category":null,"description":"The BIOM (Biological Observation Matrix) format is a standardized format for representing counts of observations (e.g., OTUs, genes) across samples. This Python library provides read/write support for BIOM files, including HDF5 and JSON backends. Current version: 2.1.17. Released as needed; maintained by the QIIME 2 and scikit-bio ecosystems.","language":"python","status":"active","version":"2.1.17","tags":["biological-data","microbiome","HDF5","JSON","OTU-table","sequence-counts"],"install":[{"cmd":"pip install biom-format","imports":["from biom import Table","from biom import load_table"]},{"cmd":"pip install 'biom-format[hdf5]'","imports":[]}],"homepage":"http://www.biom-format.org","github":null,"docs":null,"changelog":null,"pypi":"https://pypi.org/project/biom-format/","npm":null,"openapi_spec":null,"status_page":null,"smithery":null,"compatibility":{"summary":{"python_range":"3.10–3.9","success_rate":50,"avg_install_s":12.3,"avg_import_s":0.97,"wheel_type":"wheel"},"url":"https://checklist.day/v1/registry/biom-format/compatibility"},"provenance":{"verified_status":"passing","verified_at":"Sun Jun 28","last_verified":"Sun Jun 28","next_check":"Tue Jul 28","install_tag":null}}