{"slug":"wjlim/nf-core_mcp","name":"nf-core MCP Server","description":"Manage and navigate local nf-core pipeline repositories.","category":"development","tags":[],"official":false,"stars":0,"transport":null,"install":[{"cmd":"npx -y nf-core-mcp","imports":[]}],"tools":[{"name":"list-pipelines","description":"Lists all nf-core pipelines in the workspace. Shows configuration file status. No parameters required."},{"name":"get-pipeline-modules","description":"Gets module information from a pipeline. Parameters: pipeline (Pipeline name: rnaseq, sarek, or modules)."},{"name":"search-pipelines","description":"Searches through pipeline files. Parameters: query (Search query), pipeline (optional, specific pipeline to search)."}],"env_vars":[],"auth_type":"none","github":"https://github.com/wjlim/nf-core_mcp","homepage":"","server_url":"","status":"active","source":"mcpservers.org","updated_at":"Thu May 28"}