bioc - Processing BioC, Brat, and PubTator with Python
JSON →bioc is a Python library designed for processing and manipulating data in BioC XML/JSON, Brat standoff, and PubTator formats. It provides an API that facilitates reading, writing, and working with these common bioinformatics text mining annotation formats. Currently at version 2.1, the library undergoes releases with a focus on supporting the latest Python versions and format specifications.
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API endpoints
full doc /v1/registry/bioc
install /v1/registry/bioc/install
compatibility /v1/registry/bioc/compatibility