OpenCRAVAT
JSON →Genetic variant annotation
Tools · 7
- get_annotators Discover which OpenCRAVAT annotators are being run (a curated default set)
- get_annotator_schema Inspect annotator output schemas (field names/types/descriptions)
- annotate_variant Annotate variants by genomic coordinates (chrom/pos/ref/alt). Accepts only GRCh38/hg38 coordinates
- annotate_rsid Annotate variants by dbSNP rsID
- annotate_caid Annotate variants by ClinGen Allele Registry ID (CAid)
- annotate_hgvs Annotate variants by HGVS notation (g./c./p.)
- convert_protein_to_hgvs Convert a protein missense notation (e.g., BRAF V600E) into candidate GRCh38 genomic HGVS changes (via SynVar), which you can then pass to HGVS annotation
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